Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 GMCL1P1-201ENST00000463439 1581 ntBASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
FOXR1Q6PIV2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 RN7SL510P-201ENST00000581311 263 ntBASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 AC011498.5-201ENST00000592027 486 ntBASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 AL121672.3-201ENST00000608644 468 ntBASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 OR6D1P-202ENST00000641007 5290 ntBASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
FOXR1Q6PIV2 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.02■□□□□ 0.48
FOXR1Q6PIV2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FOXR1Q6PIV2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXR1Q6PIV2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FOXR1Q6PIV2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXR1Q6PIV2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
FOXR1Q6PIV2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
FOXR1Q6PIV2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXR1Q6PIV2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.02■□□□□ 0.47
FOXR1Q6PIV2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
FOXR1Q6PIV2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
FOXR1Q6PIV2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms