Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
LYSMD4Q5XG99 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 AC069120.2-201ENST00000524091 540 ntBASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 AC109635.5-201ENST00000533593 962 ntBASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 AP000974.1-201ENST00000623909 2387 ntBASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LYSMD4Q5XG99 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 GK-202ENST00000378941 458 ntTSL 3 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
LYSMD4Q5XG99 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 AC084121.4-201ENST00000641598 221 ntBASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 AF228730.8-201ENST00000642140 221 ntBASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
LYSMD4Q5XG99 WASH6P-202ENST00000359512 1437 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms