Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 AC135586.1-201ENST00000539323 574 ntBASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 LINC00895-201ENST00000629028 1637 ntBASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 WIZP1-201ENST00000531444 2299 ntBASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 AL391825.1-201ENST00000457671 1364 ntBASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC27.74■■■□□ 2.03
SNAPC4Q5SXM2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 AL035456.1-201ENST00000456064 1369 ntBASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 FAM86MP-201ENST00000340703 885 ntBASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.03
SNAPC4Q5SXM2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 HLA-H-201ENST00000383620 1096 ntBASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
SNAPC4Q5SXM2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 TTTY23B-201ENST00000442790 549 ntBASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC27.71■■■□□ 2.03
SNAPC4Q5SXM2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 MPV17-208ENST00000405076 603 ntTSL 5 BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 RASL12-203ENST00000434605 982 ntTSL 2 BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 REXO1L6P-201ENST00000603433 1515 ntBASIC27.7■■■□□ 2.03
SNAPC4Q5SXM2 REXO1L9P-201ENST00000604264 2108 ntBASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
SNAPC4Q5SXM2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC27.7■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms