Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PTPN20Q4JDL3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 AC139887.3-201ENST00000568585 713 ntBASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 AL031008.1-201ENST00000619963 541 ntBASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 AC004706.3-202ENST00000621574 984 ntBASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
PTPN20Q4JDL3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 AC009053.2-201ENST00000563701 2365 ntBASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 AC004870.1-201ENST00000315132 882 ntBASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 RPS2P1-201ENST00000434010 821 ntBASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 AC018712.1-201ENST00000455767 687 ntBASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 AC107918.4-202ENST00000641623 219 ntBASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PTPN20Q4JDL3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 PRORSD1P-202ENST00000563365 2154 ntBASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 ELK2BP-201ENST00000415014 1224 ntBASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 LAGE3P1-201ENST00000425356 484 ntBASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 HNRNPDP1-201ENST00000439535 754 ntBASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 FAM197Y8-203ENST00000450145 560 ntBASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 AC073648.2-201ENST00000510116 352 ntBASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 AC104692.2-201ENST00000603054 253 ntBASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PTPN20Q4JDL3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms