Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CXCR4P61073 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CXCR4P61073 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
CXCR4P61073 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.75■□□□□ 0.11
CXCR4P61073 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CXCR4P61073 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.74■□□□□ 0.11
CXCR4P61073 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.74■□□□□ 0.11
CXCR4P61073 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.74■□□□□ 0.11
CXCR4P61073 AP000523.1-201ENST00000398242 1049 ntBASIC15.74■□□□□ 0.11
CXCR4P61073 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.74■□□□□ 0.11
CXCR4P61073 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.74■□□□□ 0.11
CXCR4P61073 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.74■□□□□ 0.11
CXCR4P61073 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.74■□□□□ 0.11
CXCR4P61073 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.74■□□□□ 0.11
CXCR4P61073 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.74■□□□□ 0.11
CXCR4P61073 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.74■□□□□ 0.11
CXCR4P61073 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CXCR4P61073 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CXCR4P61073 HLA-A-202ENST00000376806 1854 ntBASIC15.74■□□□□ 0.11
CXCR4P61073 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CXCR4P61073 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 AC005052.1-201ENST00000625181 2492 ntBASIC15.73■□□□□ 0.11
CXCR4P61073 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 KRT89P-201ENST00000620027 1478 ntBASIC15.73■□□□□ 0.11
CXCR4P61073 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.73■□□□□ 0.11
CXCR4P61073 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CXCR4P61073 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CXCR4P61073 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 AP006294.2-201ENST00000641667 209 ntBASIC15.73■□□□□ 0.11
CXCR4P61073 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CXCR4P61073 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CXCR4P61073 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.73■□□□□ 0.11
CXCR4P61073 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CXCR4P61073 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCR4P61073 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.72■□□□□ 0.11
CXCR4P61073 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCR4P61073 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
CXCR4P61073 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCR4P61073 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.72■□□□□ 0.11
CXCR4P61073 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCR4P61073 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.72■□□□□ 0.11
CXCR4P61073 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CXCR4P61073 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms