Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 SNX33P1-201ENST00000592116 1762 ntBASIC18.39■□□□□ 0.53
MCCD1P59942 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
MCCD1P59942 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MCCD1P59942 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
MCCD1P59942 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MCCD1P59942 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MCCD1P59942 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
MCCD1P59942 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.38■□□□□ 0.53
MCCD1P59942 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
MCCD1P59942 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.38■□□□□ 0.53
MCCD1P59942 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
MCCD1P59942 LTB4R2-202ENST00000528054 3092 ntBASIC18.38■□□□□ 0.53
MCCD1P59942 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MCCD1P59942 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MCCD1P59942 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MCCD1P59942 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.38■□□□□ 0.53
MCCD1P59942 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.38■□□□□ 0.53
MCCD1P59942 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.38■□□□□ 0.53
MCCD1P59942 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.38■□□□□ 0.53
MCCD1P59942 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.38■□□□□ 0.53
MCCD1P59942 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.38■□□□□ 0.53
MCCD1P59942 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
MCCD1P59942 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
MCCD1P59942 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
MCCD1P59942 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
MCCD1P59942 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.38■□□□□ 0.53
MCCD1P59942 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MCCD1P59942 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MCCD1P59942 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.38■□□□□ 0.53
MCCD1P59942 RNF216P1-203ENST00000404404 2427 ntBASIC18.38■□□□□ 0.53
MCCD1P59942 PI4KAP1-204ENST00000612579 1703 ntBASIC18.37■□□□□ 0.53
MCCD1P59942 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.37■□□□□ 0.53
MCCD1P59942 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
MCCD1P59942 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.37■□□□□ 0.53
MCCD1P59942 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 PRSS29P-201ENST00000440800 595 ntBASIC18.37■□□□□ 0.53
MCCD1P59942 FDX1P1-201ENST00000449115 551 ntBASIC18.37■□□□□ 0.53
MCCD1P59942 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.37■□□□□ 0.53
MCCD1P59942 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.37■□□□□ 0.53
MCCD1P59942 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.37■□□□□ 0.53
MCCD1P59942 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.37■□□□□ 0.53
MCCD1P59942 MPDU1-223ENST00000582151 728 ntBASIC18.37■□□□□ 0.53
MCCD1P59942 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
MCCD1P59942 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.37■□□□□ 0.53
MCCD1P59942 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.37■□□□□ 0.53
MCCD1P59942 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 AC129492.6-201ENST00000611383 1305 ntBASIC18.37■□□□□ 0.53
MCCD1P59942 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.37■□□□□ 0.53
MCCD1P59942 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
MCCD1P59942 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
MCCD1P59942 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.36■□□□□ 0.53
MCCD1P59942 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC18.36■□□□□ 0.53
MCCD1P59942 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MCCD1P59942 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.36■□□□□ 0.53
MCCD1P59942 AC009078.2-202ENST00000463353 338 ntBASIC18.36■□□□□ 0.53
MCCD1P59942 HLA-J-202ENST00000469281 1241 ntBASIC18.36■□□□□ 0.53
MCCD1P59942 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
MCCD1P59942 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.36■□□□□ 0.53
MCCD1P59942 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.36■□□□□ 0.53
MCCD1P59942 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
MCCD1P59942 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.36■□□□□ 0.53
MCCD1P59942 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.36■□□□□ 0.53
MCCD1P59942 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.36■□□□□ 0.53
MCCD1P59942 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms