Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PER3P56645 MST1L-201ENST00000442552 2185 ntBASIC16.02■□□□□ 0.16
PER3P56645 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.02■□□□□ 0.16
PER3P56645 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PER3P56645 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.02■□□□□ 0.16
PER3P56645 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.02■□□□□ 0.16
PER3P56645 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PER3P56645 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.02■□□□□ 0.16
PER3P56645 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.02■□□□□ 0.16
PER3P56645 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.02■□□□□ 0.16
PER3P56645 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PER3P56645 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PER3P56645 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.02■□□□□ 0.15
PER3P56645 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PER3P56645 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PER3P56645 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PER3P56645 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PER3P56645 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.01■□□□□ 0.15
PER3P56645 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PER3P56645 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.01■□□□□ 0.15
PER3P56645 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.01■□□□□ 0.15
PER3P56645 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PER3P56645 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.01■□□□□ 0.15
PER3P56645 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
PER3P56645 AL138831.2-201ENST00000606564 490 ntBASIC16.01■□□□□ 0.15
PER3P56645 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PER3P56645 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PER3P56645 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.01■□□□□ 0.15
PER3P56645 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PER3P56645 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.01■□□□□ 0.15
PER3P56645 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PER3P56645 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16■□□□□ 0.15
PER3P56645 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PER3P56645 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PER3P56645 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
PER3P56645 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16■□□□□ 0.15
PER3P56645 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16■□□□□ 0.15
PER3P56645 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16■□□□□ 0.15
PER3P56645 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 AC211486.1-202ENST00000416371 468 ntBASIC16■□□□□ 0.15
PER3P56645 AC211476.1-201ENST00000503899 468 ntBASIC16■□□□□ 0.15
PER3P56645 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16■□□□□ 0.15
PER3P56645 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16■□□□□ 0.15
PER3P56645 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 MIR1199-201ENST00000621445 119 ntBASIC16■□□□□ 0.15
PER3P56645 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16■□□□□ 0.15
PER3P56645 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PER3P56645 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
PER3P56645 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PER3P56645 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16■□□□□ 0.15
PER3P56645 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16■□□□□ 0.15
PER3P56645 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
PER3P56645 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16■□□□□ 0.15
PER3P56645 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PER3P56645 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PER3P56645 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.99■□□□□ 0.15
PER3P56645 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PER3P56645 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
PER3P56645 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms