Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH12P55289 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDH12P55289 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH12P55289 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH12P55289 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH12P55289 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH12P55289 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH12P55289 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH12P55289 DOC2GP-204ENST00000639052 2548 ntBASIC16.11■□□□□ 0.17
CDH12P55289 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH12P55289 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH12P55289 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH12P55289 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH12P55289 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH12P55289 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH12P55289 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH12P55289 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH12P55289 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH12P55289 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH12P55289 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDH12P55289 SLC25A1P3-201ENST00000395415 828 ntBASIC16.1■□□□□ 0.17
CDH12P55289 AL645929.1-201ENST00000420084 975 ntBASIC16.1■□□□□ 0.17
CDH12P55289 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 AC002558.1-201ENST00000488906 803 ntBASIC16.1■□□□□ 0.17
CDH12P55289 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH12P55289 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH12P55289 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH12P55289 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH12P55289 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 AL603756.1-201ENST00000606511 2163 ntBASIC16.1■□□□□ 0.17
CDH12P55289 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDH12P55289 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH12P55289 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH12P55289 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CDH12P55289 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH12P55289 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.09■□□□□ 0.17
CDH12P55289 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH12P55289 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.09■□□□□ 0.17
CDH12P55289 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH12P55289 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDH12P55289 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH12P55289 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDH12P55289 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH12P55289 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH12P55289 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.09■□□□□ 0.17
CDH12P55289 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH12P55289 LINC01238-205ENST00000567549 1107 ntBASIC16.09■□□□□ 0.17
CDH12P55289 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH12P55289 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CDH12P55289 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH12P55289 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH12P55289 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH12P55289 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH12P55289 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH12P55289 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH12P55289 RNF216P1-203ENST00000404404 2427 ntBASIC16.09■□□□□ 0.17
CDH12P55289 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH12P55289 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDH12P55289 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDH12P55289 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDH12P55289 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms