Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
CDH11P55287 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.84■□□□□ 0.13
CDH11P55287 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CDH11P55287 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 AP002383.4-201ENST00000442518 975 ntBASIC15.84■□□□□ 0.13
CDH11P55287 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
CDH11P55287 MIR3180-1-201ENST00000580374 94 ntBASIC15.84■□□□□ 0.13
CDH11P55287 MIR3180-3-201ENST00000584616 94 ntBASIC15.84■□□□□ 0.13
CDH11P55287 AC005332.3-201ENST00000589904 676 ntBASIC15.84■□□□□ 0.13
CDH11P55287 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.84■□□□□ 0.13
CDH11P55287 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH11P55287 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH11P55287 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CDH11P55287 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.84■□□□□ 0.13
CDH11P55287 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.84■□□□□ 0.13
CDH11P55287 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CDH11P55287 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH11P55287 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
CDH11P55287 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH11P55287 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.83■□□□□ 0.13
CDH11P55287 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH11P55287 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
CDH11P55287 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH11P55287 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH11P55287 AC116353.5-201ENST00000638148 1699 ntBASIC15.83■□□□□ 0.13
CDH11P55287 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH11P55287 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
CDH11P55287 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
CDH11P55287 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH11P55287 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH11P55287 LINC00265-3P-201ENST00000447588 903 ntBASIC15.83■□□□□ 0.12
CDH11P55287 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH11P55287 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH11P55287 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.83■□□□□ 0.12
CDH11P55287 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.83■□□□□ 0.12
CDH11P55287 AC024563.2-201ENST00000603282 481 ntBASIC15.83■□□□□ 0.12
CDH11P55287 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH11P55287 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.83■□□□□ 0.12
CDH11P55287 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH11P55287 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH11P55287 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.83■□□□□ 0.12
CDH11P55287 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CDH11P55287 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CDH11P55287 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH11P55287 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH11P55287 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.82■□□□□ 0.12
CDH11P55287 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CDH11P55287 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDH11P55287 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH11P55287 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CDH11P55287 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.82■□□□□ 0.12
CDH11P55287 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CDH11P55287 AC005104.2-201ENST00000427818 678 ntBASIC15.82■□□□□ 0.12
CDH11P55287 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms