Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 PRORSD1P-202ENST00000563365 2154 ntBASIC18.48■□□□□ 0.55
VCPP55072 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.48■□□□□ 0.55
VCPP55072 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
VCPP55072 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCPP55072 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCPP55072 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.48■□□□□ 0.55
VCPP55072 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.48■□□□□ 0.55
VCPP55072 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
VCPP55072 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.47■□□□□ 0.55
VCPP55072 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.47■□□□□ 0.55
VCPP55072 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VCPP55072 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VCPP55072 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VCPP55072 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.47■□□□□ 0.55
VCPP55072 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.47■□□□□ 0.55
VCPP55072 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.47■□□□□ 0.55
VCPP55072 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VCPP55072 MCCD1P2-201ENST00000423228 335 ntBASIC18.47■□□□□ 0.55
VCPP55072 CNN2P11-201ENST00000429351 262 ntBASIC18.47■□□□□ 0.55
VCPP55072 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.47■□□□□ 0.55
VCPP55072 ABCD1P5-201ENST00000445663 754 ntBASIC18.47■□□□□ 0.55
VCPP55072 PAWRP1-201ENST00000451083 565 ntBASIC18.47■□□□□ 0.55
VCPP55072 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.47■□□□□ 0.55
VCPP55072 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.47■□□□□ 0.55
VCPP55072 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.47■□□□□ 0.55
VCPP55072 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.47■□□□□ 0.55
VCPP55072 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.47■□□□□ 0.55
VCPP55072 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VCPP55072 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.46■□□□□ 0.55
VCPP55072 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.46■□□□□ 0.55
VCPP55072 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VCPP55072 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.46■□□□□ 0.55
VCPP55072 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.46■□□□□ 0.55
VCPP55072 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.46■□□□□ 0.55
VCPP55072 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VCPP55072 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.46■□□□□ 0.55
VCPP55072 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.46■□□□□ 0.55
VCPP55072 AC116407.2-201ENST00000613639 860 ntBASIC18.46■□□□□ 0.55
VCPP55072 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.46■□□□□ 0.55
VCPP55072 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
VCPP55072 AC009949.1-201ENST00000623048 1830 ntBASIC18.46■□□□□ 0.55
VCPP55072 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.46■□□□□ 0.55
VCPP55072 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.46■□□□□ 0.55
VCPP55072 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.46■□□□□ 0.55
VCPP55072 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
VCPP55072 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VCPP55072 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.46■□□□□ 0.55
VCPP55072 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VCPP55072 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.54
VCPP55072 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
VCPP55072 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
VCPP55072 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.45■□□□□ 0.54
VCPP55072 KRT8P47-201ENST00000604727 1398 ntBASIC18.45■□□□□ 0.54
VCPP55072 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
VCPP55072 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.45■□□□□ 0.54
VCPP55072 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
VCPP55072 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
VCPP55072 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.45■□□□□ 0.54
VCPP55072 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
VCPP55072 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.45■□□□□ 0.54
VCPP55072 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.45■□□□□ 0.54
VCPP55072 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.45■□□□□ 0.54
VCPP55072 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms