Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 SPDYE11-202ENST00000450699 704 ntBASIC18.06■□□□□ 0.48
CLCN4P51793 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN4P51793 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN4P51793 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.06■□□□□ 0.48
CLCN4P51793 SPDYE9P-201ENST00000570642 692 ntBASIC18.06■□□□□ 0.48
CLCN4P51793 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.06■□□□□ 0.48
CLCN4P51793 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.06■□□□□ 0.48
CLCN4P51793 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 SPDYE10P-202ENST00000612005 668 ntBASIC18.06■□□□□ 0.48
CLCN4P51793 SPDYE8P-202ENST00000612377 668 ntBASIC18.06■□□□□ 0.48
CLCN4P51793 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CLCN4P51793 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN4P51793 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN4P51793 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN4P51793 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN4P51793 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
CLCN4P51793 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCN4P51793 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.06■□□□□ 0.48
CLCN4P51793 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCN4P51793 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC18.05■□□□□ 0.48
CLCN4P51793 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN4P51793 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN4P51793 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCN4P51793 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN4P51793 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.05■□□□□ 0.48
CLCN4P51793 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.05■□□□□ 0.48
CLCN4P51793 COX20P2-201ENST00000452636 358 ntBASIC18.05■□□□□ 0.48
CLCN4P51793 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCN4P51793 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN4P51793 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.05■□□□□ 0.48
CLCN4P51793 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 LINC01451-201ENST00000623792 534 ntBASIC18.05■□□□□ 0.48
CLCN4P51793 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCN4P51793 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCN4P51793 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCN4P51793 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCN4P51793 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCN4P51793 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLCN4P51793 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN4P51793 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCN4P51793 AC005237.2-201ENST00000434368 219 ntBASIC18.04■□□□□ 0.48
CLCN4P51793 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.04■□□□□ 0.48
CLCN4P51793 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.04■□□□□ 0.48
CLCN4P51793 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN4P51793 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN4P51793 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.04■□□□□ 0.48
CLCN4P51793 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.04■□□□□ 0.48
CLCN4P51793 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCN4P51793 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 Z92544.3-201ENST00000624747 417 ntBASIC18.04■□□□□ 0.48
CLCN4P51793 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
CLCN4P51793 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.04■□□□□ 0.48
CLCN4P51793 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.04■□□□□ 0.48
CLCN4P51793 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CLCN4P51793 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCN4P51793 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CLCN4P51793 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.04■□□□□ 0.48
CLCN4P51793 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCN4P51793 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CLCN4P51793 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CLCN4P51793 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCN4P51793 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms