Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.96■□□□□ 0.47
MMP13P45452 AC138894.3-201ENST00000603787 634 ntBASIC17.96■□□□□ 0.47
MMP13P45452 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP13P45452 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.96■□□□□ 0.47
MMP13P45452 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.96■□□□□ 0.47
MMP13P45452 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MMP13P45452 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
MMP13P45452 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP13P45452 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP13P45452 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP13P45452 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP13P45452 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MMP13P45452 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP13P45452 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP13P45452 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
MMP13P45452 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
MMP13P45452 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP13P45452 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP13P45452 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.95■□□□□ 0.46
MMP13P45452 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
MMP13P45452 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.95■□□□□ 0.46
MMP13P45452 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MMP13P45452 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.95■□□□□ 0.46
MMP13P45452 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.95■□□□□ 0.46
MMP13P45452 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MMP13P45452 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
MMP13P45452 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP13P45452 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP13P45452 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
MMP13P45452 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.94■□□□□ 0.46
MMP13P45452 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MMP13P45452 INTS4P1-201ENST00000438455 1935 ntBASIC17.94■□□□□ 0.46
MMP13P45452 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.94■□□□□ 0.46
MMP13P45452 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP13P45452 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.94■□□□□ 0.46
MMP13P45452 AC103564.2-201ENST00000432853 1299 ntBASIC17.94■□□□□ 0.46
MMP13P45452 NUS1P1-201ENST00000446295 882 ntBASIC17.94■□□□□ 0.46
MMP13P45452 FOSL1P1-201ENST00000511041 816 ntBASIC17.94■□□□□ 0.46
MMP13P45452 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP13P45452 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.94■□□□□ 0.46
MMP13P45452 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.94■□□□□ 0.46
MMP13P45452 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MMP13P45452 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.94■□□□□ 0.46
MMP13P45452 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP13P45452 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
MMP13P45452 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
MMP13P45452 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.94■□□□□ 0.46
MMP13P45452 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
MMP13P45452 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MMP13P45452 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MMP13P45452 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP13P45452 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.94■□□□□ 0.46
MMP13P45452 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MMP13P45452 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
MMP13P45452 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP13P45452 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP13P45452 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MMP13P45452 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP13P45452 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MMP13P45452 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP13P45452 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP13P45452 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.93■□□□□ 0.46
MMP13P45452 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MMP13P45452 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP13P45452 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MMP13P45452 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.93■□□□□ 0.46
MMP13P45452 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.93■□□□□ 0.46
MMP13P45452 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.93■□□□□ 0.46
MMP13P45452 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP13P45452 AC002558.1-201ENST00000488906 803 ntBASIC17.93■□□□□ 0.46
MMP13P45452 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.93■□□□□ 0.46
MMP13P45452 PRELID1P1-202ENST00000567272 903 ntBASIC17.93■□□□□ 0.46
MMP13P45452 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MMP13P45452 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP13P45452 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.93■□□□□ 0.46
MMP13P45452 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.93■□□□□ 0.46
MMP13P45452 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms