Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC1A1P43005 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SLC1A1P43005 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 RCN1P2-201ENST00000398357 915 ntBASIC18.06■□□□□ 0.48
SLC1A1P43005 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC1A1P43005 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC1A1P43005 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC1A1P43005 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC1A1P43005 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.06■□□□□ 0.48
SLC1A1P43005 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
SLC1A1P43005 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.06■□□□□ 0.48
SLC1A1P43005 AP000867.4-201ENST00000641616 219 ntBASIC18.06■□□□□ 0.48
SLC1A1P43005 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
SLC1A1P43005 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SLC1A1P43005 PCDHA14-201ENST00000506751 2298 ntBASIC18.06■□□□□ 0.48
SLC1A1P43005 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SLC1A1P43005 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC1A1P43005 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SLC1A1P43005 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC1A1P43005 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
SLC1A1P43005 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
SLC1A1P43005 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC1A1P43005 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC1A1P43005 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
SLC1A1P43005 AC078925.2-201ENST00000624013 1973 ntBASIC18.05■□□□□ 0.48
SLC1A1P43005 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 AL020989.1-201ENST00000422979 469 ntBASIC18.05■□□□□ 0.48
SLC1A1P43005 FAM210CP-201ENST00000445714 574 ntBASIC18.05■□□□□ 0.48
SLC1A1P43005 SIGLEC30P-201ENST00000455569 941 ntBASIC18.05■□□□□ 0.48
SLC1A1P43005 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 AC096582.2-201ENST00000510860 516 ntBASIC18.05■□□□□ 0.48
SLC1A1P43005 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC1A1P43005 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.05■□□□□ 0.48
SLC1A1P43005 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SLC1A1P43005 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 AC114341.1-201ENST00000618070 349 ntBASIC18.05■□□□□ 0.48
SLC1A1P43005 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.05■□□□□ 0.48
SLC1A1P43005 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.05■□□□□ 0.48
SLC1A1P43005 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC1A1P43005 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
SLC1A1P43005 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC1A1P43005 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
SLC1A1P43005 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.05■□□□□ 0.48
SLC1A1P43005 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SLC1A1P43005 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC1A1P43005 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC1A1P43005 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC1A1P43005 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SLC1A1P43005 ACTG1P4-201ENST00000425123 1122 ntBASIC18.04■□□□□ 0.48
SLC1A1P43005 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.04■□□□□ 0.48
SLC1A1P43005 LINC00265-3P-201ENST00000447588 903 ntBASIC18.04■□□□□ 0.48
SLC1A1P43005 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.04■□□□□ 0.48
SLC1A1P43005 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.04■□□□□ 0.48
SLC1A1P43005 AC087388.1-201ENST00000571370 1112 ntBASIC18.04■□□□□ 0.48
SLC1A1P43005 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC1A1P43005 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.04■□□□□ 0.48
SLC1A1P43005 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SLC1A1P43005 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
SLC1A1P43005 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms