Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AKAP8P1-201ENST00000434743 1349 ntBASIC21.7■■□□□ 1.06
COL15A1P39059 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.7■■□□□ 1.06
COL15A1P39059 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.7■■□□□ 1.06
COL15A1P39059 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.7■■□□□ 1.06
COL15A1P39059 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL15A1P39059 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL15A1P39059 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.7■■□□□ 1.06
COL15A1P39059 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.7■■□□□ 1.06
COL15A1P39059 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL15A1P39059 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
COL15A1P39059 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
COL15A1P39059 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.7■■□□□ 1.06
COL15A1P39059 MIR4515-201ENST00000584082 81 ntBASIC21.7■■□□□ 1.06
COL15A1P39059 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL15A1P39059 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.7■■□□□ 1.06
COL15A1P39059 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL15A1P39059 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.7■■□□□ 1.06
COL15A1P39059 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
COL15A1P39059 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.7■■□□□ 1.06
COL15A1P39059 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
COL15A1P39059 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
COL15A1P39059 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.69■■□□□ 1.06
COL15A1P39059 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
COL15A1P39059 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC21.69■■□□□ 1.06
COL15A1P39059 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.69■■□□□ 1.06
COL15A1P39059 SPCS2P4-201ENST00000436160 681 ntBASIC21.69■■□□□ 1.06
COL15A1P39059 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
COL15A1P39059 RNA5SP421-201ENST00000516864 134 ntBASIC21.69■■□□□ 1.06
COL15A1P39059 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC21.69■■□□□ 1.06
COL15A1P39059 DUX4L17-201ENST00000557360 1267 ntBASIC21.69■■□□□ 1.06
COL15A1P39059 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC21.69■■□□□ 1.06
COL15A1P39059 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
COL15A1P39059 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
COL15A1P39059 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
COL15A1P39059 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
COL15A1P39059 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL15A1P39059 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL15A1P39059 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL15A1P39059 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.68■■□□□ 1.06
COL15A1P39059 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
COL15A1P39059 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.68■■□□□ 1.06
COL15A1P39059 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.68■■□□□ 1.06
COL15A1P39059 NAA60-208ENST00000570819 833 ntTSL 2 BASIC21.68■■□□□ 1.06
COL15A1P39059 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
COL15A1P39059 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.68■■□□□ 1.06
COL15A1P39059 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL15A1P39059 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC21.68■■□□□ 1.06
COL15A1P39059 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
COL15A1P39059 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
COL15A1P39059 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
COL15A1P39059 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
COL15A1P39059 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
COL15A1P39059 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
COL15A1P39059 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
COL15A1P39059 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
COL15A1P39059 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.67■■□□□ 1.06
COL15A1P39059 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.67■■□□□ 1.06
COL15A1P39059 KLF2P3-201ENST00000451977 1087 ntBASIC21.67■■□□□ 1.06
COL15A1P39059 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.67■■□□□ 1.06
COL15A1P39059 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.67■■□□□ 1.06
COL15A1P39059 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.67■■□□□ 1.06
COL15A1P39059 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.67■■□□□ 1.06
COL15A1P39059 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.67■■□□□ 1.06
COL15A1P39059 AL133373.2-201ENST00000623187 2828 ntBASIC21.67■■□□□ 1.06
COL15A1P39059 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
COL15A1P39059 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.67■■□□□ 1.06
COL15A1P39059 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
COL15A1P39059 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.67■■□□□ 1.06
COL15A1P39059 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL15A1P39059 TUBB3P1-201ENST00000405796 1332 ntBASIC21.66■■□□□ 1.06
COL15A1P39059 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
COL15A1P39059 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL15A1P39059 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
COL15A1P39059 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms