Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCLP35914 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCLP35914 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 AP002414.1-201ENST00000391405 1147 ntBASIC17.14■□□□□ 0.33
HMGCLP35914 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 PTCHD3P3-201ENST00000403073 906 ntBASIC17.14■□□□□ 0.33
HMGCLP35914 AP001005.1-201ENST00000571755 1248 ntBASIC17.14■□□□□ 0.33
HMGCLP35914 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGCLP35914 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGCLP35914 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCLP35914 PGM5P2-202ENST00000637225 1043 ntBASIC17.14■□□□□ 0.33
HMGCLP35914 AL805961.1-202ENST00000641562 540 ntBASIC17.14■□□□□ 0.33
HMGCLP35914 FRMD8P1-201ENST00000440433 1524 ntBASIC17.14■□□□□ 0.33
HMGCLP35914 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HMGCLP35914 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
HMGCLP35914 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCLP35914 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGCLP35914 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCLP35914 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCLP35914 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCLP35914 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HMGCLP35914 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMGCLP35914 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCLP35914 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
HMGCLP35914 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HMGCLP35914 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGCLP35914 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCLP35914 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 FDX1P1-201ENST00000449115 551 ntBASIC17.13■□□□□ 0.33
HMGCLP35914 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
HMGCLP35914 TERC-201ENST00000602385 541 ntBASIC17.13■□□□□ 0.33
HMGCLP35914 AL356488.2-201ENST00000602755 427 ntBASIC17.13■□□□□ 0.33
HMGCLP35914 MIR1199-201ENST00000621445 119 ntBASIC17.13■□□□□ 0.33
HMGCLP35914 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCLP35914 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 HLA-A-201ENST00000376802 1334 ntBASIC17.13■□□□□ 0.33
HMGCLP35914 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCLP35914 OR6D1P-202ENST00000641007 5290 ntBASIC17.13■□□□□ 0.33
HMGCLP35914 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGCLP35914 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCLP35914 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
HMGCLP35914 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
HMGCLP35914 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCLP35914 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCLP35914 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGCLP35914 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGCLP35914 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCLP35914 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGCLP35914 AC093909.1-201ENST00000504731 1122 ntBASIC17.12■□□□□ 0.33
HMGCLP35914 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGCLP35914 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGCLP35914 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.12■□□□□ 0.33
HMGCLP35914 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGCLP35914 MIR7706-201ENST00000613747 67 ntBASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms