Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN1P35523 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN1P35523 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CLCN1P35523 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.65■□□□□ 0.74
CLCN1P35523 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CLCN1P35523 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLCN1P35523 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CLCN1P35523 C8orf49-201ENST00000525043 1968 ntBASIC19.64■□□□□ 0.74
CLCN1P35523 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.64■□□□□ 0.74
CLCN1P35523 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.64■□□□□ 0.74
CLCN1P35523 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
CLCN1P35523 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCN1P35523 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.64■□□□□ 0.73
CLCN1P35523 SEC1P-202ENST00000473944 940 ntBASIC19.64■□□□□ 0.73
CLCN1P35523 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.64■□□□□ 0.73
CLCN1P35523 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.64■□□□□ 0.73
CLCN1P35523 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.64■□□□□ 0.73
CLCN1P35523 AC012183.1-201ENST00000625197 499 ntBASIC19.64■□□□□ 0.73
CLCN1P35523 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.64■□□□□ 0.73
CLCN1P35523 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 KRT18P22-201ENST00000402024 1347 ntBASIC19.64■□□□□ 0.73
CLCN1P35523 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.64■□□□□ 0.73
CLCN1P35523 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
CLCN1P35523 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.64■□□□□ 0.73
CLCN1P35523 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CLCN1P35523 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CLCN1P35523 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.64■□□□□ 0.73
CLCN1P35523 GOLGA8DP-202ENST00000341390 2184 ntBASIC19.64■□□□□ 0.73
CLCN1P35523 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC19.64■□□□□ 0.73
CLCN1P35523 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CLCN1P35523 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.63■□□□□ 0.73
CLCN1P35523 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.63■□□□□ 0.73
CLCN1P35523 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLCN1P35523 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.63■□□□□ 0.73
CLCN1P35523 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLCN1P35523 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CLCN1P35523 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.63■□□□□ 0.73
CLCN1P35523 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CLCN1P35523 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CLCN1P35523 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CLCN1P35523 CROCCP1-201ENST00000426910 5675 ntBASIC19.62■□□□□ 0.73
CLCN1P35523 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN1P35523 AC092364.2-201ENST00000596710 2692 ntBASIC19.62■□□□□ 0.73
CLCN1P35523 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CLCN1P35523 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
CLCN1P35523 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.62■□□□□ 0.73
CLCN1P35523 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.62■□□□□ 0.73
CLCN1P35523 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.62■□□□□ 0.73
CLCN1P35523 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCN1P35523 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
CLCN1P35523 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCN1P35523 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.62■□□□□ 0.73
CLCN1P35523 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms