Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABRA3P34903 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABRA3P34903 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABRA3P34903 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.06■□□□□ 0.16
GABRA3P34903 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.06■□□□□ 0.16
GABRA3P34903 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.06■□□□□ 0.16
GABRA3P34903 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GABRA3P34903 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.06■□□□□ 0.16
GABRA3P34903 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABRA3P34903 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.06■□□□□ 0.16
GABRA3P34903 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABRA3P34903 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.06■□□□□ 0.16
GABRA3P34903 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABRA3P34903 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GABRA3P34903 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GABRA3P34903 AC097637.2-201ENST00000624096 1997 ntBASIC16.06■□□□□ 0.16
GABRA3P34903 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.05■□□□□ 0.16
GABRA3P34903 LINC02012-201ENST00000608206 1725 ntBASIC16.05■□□□□ 0.16
GABRA3P34903 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GABRA3P34903 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.05■□□□□ 0.16
GABRA3P34903 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.05■□□□□ 0.16
GABRA3P34903 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.05■□□□□ 0.16
GABRA3P34903 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.05■□□□□ 0.16
GABRA3P34903 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 RBM17P3-201ENST00000417687 1192 ntBASIC16.05■□□□□ 0.16
GABRA3P34903 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.05■□□□□ 0.16
GABRA3P34903 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.05■□□□□ 0.16
GABRA3P34903 BX005266.1-201ENST00000473402 457 ntBASIC16.05■□□□□ 0.16
GABRA3P34903 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.05■□□□□ 0.16
GABRA3P34903 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
GABRA3P34903 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.05■□□□□ 0.16
GABRA3P34903 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
GABRA3P34903 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GABRA3P34903 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
GABRA3P34903 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
GABRA3P34903 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GABRA3P34903 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.04■□□□□ 0.16
GABRA3P34903 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.04■□□□□ 0.16
GABRA3P34903 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.04■□□□□ 0.16
GABRA3P34903 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
GABRA3P34903 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.04■□□□□ 0.16
GABRA3P34903 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.04■□□□□ 0.16
GABRA3P34903 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.04■□□□□ 0.16
GABRA3P34903 AC073592.4-201ENST00000623827 446 ntBASIC16.04■□□□□ 0.16
GABRA3P34903 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
GABRA3P34903 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.04■□□□□ 0.16
GABRA3P34903 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.04■□□□□ 0.16
GABRA3P34903 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
GABRA3P34903 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.03■□□□□ 0.16
GABRA3P34903 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.03■□□□□ 0.16
GABRA3P34903 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.03■□□□□ 0.16
GABRA3P34903 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
GABRA3P34903 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
GABRA3P34903 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.03■□□□□ 0.16
GABRA3P34903 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GABRA3P34903 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.03■□□□□ 0.16
GABRA3P34903 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
GABRA3P34903 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms