Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXC8P31273 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC8P31273 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC8P31273 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC8P31273 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HOXC8P31273 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.63■□□□□ 0.57
HOXC8P31273 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC8P31273 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXC8P31273 AC055876.3-201ENST00000431496 288 ntBASIC18.63■□□□□ 0.57
HOXC8P31273 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.63■□□□□ 0.57
HOXC8P31273 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC8P31273 RBPMS2P1-201ENST00000437762 623 ntBASIC18.63■□□□□ 0.57
HOXC8P31273 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.63■□□□□ 0.57
HOXC8P31273 AC087641.1-201ENST00000557561 1021 ntBASIC18.63■□□□□ 0.57
HOXC8P31273 AC026150.2-201ENST00000564693 1156 ntBASIC18.63■□□□□ 0.57
HOXC8P31273 AC138649.4-201ENST00000612222 287 ntBASIC18.63■□□□□ 0.57
HOXC8P31273 AJ011932.1-201ENST00000621707 465 ntBASIC18.63■□□□□ 0.57
HOXC8P31273 TUBB3P1-201ENST00000405796 1332 ntBASIC18.63■□□□□ 0.57
HOXC8P31273 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC8P31273 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC8P31273 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
HOXC8P31273 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC8P31273 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.63■□□□□ 0.57
HOXC8P31273 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
HOXC8P31273 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC8P31273 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HOXC8P31273 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HOXC8P31273 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
HOXC8P31273 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC8P31273 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC8P31273 NOC2LP1-202ENST00000452600 2235 ntBASIC18.62■□□□□ 0.57
HOXC8P31273 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC8P31273 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXC8P31273 MIR4492-201ENST00000581627 80 ntBASIC18.62■□□□□ 0.57
HOXC8P31273 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 AC008267.7-201ENST00000624570 1194 ntBASIC18.62■□□□□ 0.57
HOXC8P31273 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC8P31273 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC8P31273 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC8P31273 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.62■□□□□ 0.57
HOXC8P31273 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HOXC8P31273 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.62■□□□□ 0.57
HOXC8P31273 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HOXC8P31273 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
HOXC8P31273 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC8P31273 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXC8P31273 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
HOXC8P31273 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.61■□□□□ 0.57
HOXC8P31273 KLF2P3-201ENST00000451977 1087 ntBASIC18.61■□□□□ 0.57
HOXC8P31273 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.61■□□□□ 0.57
HOXC8P31273 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.61■□□□□ 0.57
HOXC8P31273 AP000842.3-202ENST00000569238 1080 ntBASIC18.61■□□□□ 0.57
HOXC8P31273 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HOXC8P31273 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 AL390961.4-201ENST00000623958 2535 ntBASIC18.61■□□□□ 0.57
HOXC8P31273 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.61■□□□□ 0.57
HOXC8P31273 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HOXC8P31273 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 AC131009.4-201ENST00000624048 1740 ntBASIC18.6■□□□□ 0.57
HOXC8P31273 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXC8P31273 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.6■□□□□ 0.57
HOXC8P31273 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.6■□□□□ 0.57
HOXC8P31273 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HOXC8P31273 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms