Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 SLC25A1P3-201ENST00000395415 828 ntBASIC16.55■□□□□ 0.24
HTR1EP28566 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 AC079781.3-201ENST00000449110 356 ntBASIC16.55■□□□□ 0.24
HTR1EP28566 FOSL1P1-201ENST00000511041 816 ntBASIC16.55■□□□□ 0.24
HTR1EP28566 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.55■□□□□ 0.24
HTR1EP28566 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HTR1EP28566 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.55■□□□□ 0.24
HTR1EP28566 AL139384.1-201ENST00000612143 3047 ntBASIC16.55■□□□□ 0.24
HTR1EP28566 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.55■□□□□ 0.24
HTR1EP28566 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HTR1EP28566 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HTR1EP28566 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.54■□□□□ 0.24
HTR1EP28566 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.54■□□□□ 0.24
HTR1EP28566 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 AL157888.1-201ENST00000631930 593 ntBASIC16.54■□□□□ 0.24
HTR1EP28566 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HTR1EP28566 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
HTR1EP28566 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HTR1EP28566 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HTR1EP28566 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.53■□□□□ 0.24
HTR1EP28566 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.53■□□□□ 0.24
HTR1EP28566 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HTR1EP28566 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HTR1EP28566 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.53■□□□□ 0.24
HTR1EP28566 DRAXINP1-201ENST00000437611 948 ntBASIC16.53■□□□□ 0.24
HTR1EP28566 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.53■□□□□ 0.24
HTR1EP28566 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.53■□□□□ 0.24
HTR1EP28566 KRT18P31-201ENST00000506277 1292 ntBASIC16.53■□□□□ 0.24
HTR1EP28566 AL662844.1-201ENST00000546340 181 ntBASIC16.53■□□□□ 0.24
HTR1EP28566 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.53■□□□□ 0.24
HTR1EP28566 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.53■□□□□ 0.24
HTR1EP28566 AC024563.2-201ENST00000603282 481 ntBASIC16.53■□□□□ 0.24
HTR1EP28566 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HTR1EP28566 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.53■□□□□ 0.24
HTR1EP28566 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.53■□□□□ 0.24
HTR1EP28566 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.53■□□□□ 0.24
HTR1EP28566 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.53■□□□□ 0.24
HTR1EP28566 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.53■□□□□ 0.24
HTR1EP28566 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 AC093525.9-201ENST00000624961 1746 ntBASIC16.53■□□□□ 0.24
HTR1EP28566 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.53■□□□□ 0.24
HTR1EP28566 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HTR1EP28566 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HTR1EP28566 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms