Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.59■□□□□ 0.41
PTPN3P26045 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.59■□□□□ 0.41
PTPN3P26045 CLEC4GP1-201ENST00000596555 870 ntBASIC17.59■□□□□ 0.41
PTPN3P26045 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.59■□□□□ 0.41
PTPN3P26045 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
PTPN3P26045 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
PTPN3P26045 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN3P26045 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN3P26045 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN3P26045 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN3P26045 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.41
PTPN3P26045 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.58■□□□□ 0.41
PTPN3P26045 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN3P26045 GPR89P-201ENST00000407924 1495 ntBASIC17.58■□□□□ 0.41
PTPN3P26045 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.58■□□□□ 0.41
PTPN3P26045 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PTPN3P26045 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.41
PTPN3P26045 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
PTPN3P26045 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN3P26045 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN3P26045 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN3P26045 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.58■□□□□ 0.4
PTPN3P26045 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN3P26045 LINC00982-205ENST00000420957 435 ntBASIC17.58■□□□□ 0.4
PTPN3P26045 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.58■□□□□ 0.4
PTPN3P26045 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.58■□□□□ 0.4
PTPN3P26045 MTDHP3-201ENST00000594186 672 ntBASIC17.58■□□□□ 0.4
PTPN3P26045 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.58■□□□□ 0.4
PTPN3P26045 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.58■□□□□ 0.4
PTPN3P26045 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN3P26045 AC092068.3-201ENST00000587894 2016 ntBASIC17.58■□□□□ 0.4
PTPN3P26045 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN3P26045 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN3P26045 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN3P26045 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.58■□□□□ 0.4
PTPN3P26045 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PTPN3P26045 NKILA-202ENST00000614771 2598 ntBASIC17.58■□□□□ 0.4
PTPN3P26045 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PTPN3P26045 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PTPN3P26045 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.58■□□□□ 0.4
PTPN3P26045 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN3P26045 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN3P26045 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 AC005915.1-201ENST00000624912 2018 ntBASIC17.57■□□□□ 0.4
PTPN3P26045 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PTPN3P26045 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN3P26045 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN3P26045 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN3P26045 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN3P26045 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN3P26045 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 AKR1C7P-201ENST00000305623 895 ntBASIC17.57■□□□□ 0.4
PTPN3P26045 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PTPN3P26045 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
PTPN3P26045 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN3P26045 PRYP5-201ENST00000451909 266 ntBASIC17.57■□□□□ 0.4
PTPN3P26045 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 NKAPP1-205ENST00000585790 367 ntBASIC17.57■□□□□ 0.4
PTPN3P26045 AL355877.3-201ENST00000622820 899 ntBASIC17.57■□□□□ 0.4
PTPN3P26045 AL139288.1-201ENST00000623748 933 ntBASIC17.57■□□□□ 0.4
PTPN3P26045 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PTPN3P26045 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 FRMD8P1-201ENST00000440433 1524 ntBASIC17.57■□□□□ 0.4
PTPN3P26045 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN3P26045 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN3P26045 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
PTPN3P26045 AC106886.4-201ENST00000623557 2502 ntBASIC17.56■□□□□ 0.4
PTPN3P26045 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
PTPN3P26045 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.56■□□□□ 0.4
PTPN3P26045 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN3P26045 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
PTPN3P26045 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms