Protein–RNA interactions for Protein: P16035

TIMP2, Metalloproteinase inhibitor 2, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2P16035 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TIMP2P16035 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP2P16035 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP2P16035 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP2P16035 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP2P16035 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP2P16035 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP2P16035 AC002310.6-201ENST00000624451 1377 ntBASIC17.14■□□□□ 0.33
TIMP2P16035 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP2P16035 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMP2P16035 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMP2P16035 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TIMP2P16035 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.13■□□□□ 0.33
TIMP2P16035 RHOQP3-201ENST00000437982 621 ntBASIC17.13■□□□□ 0.33
TIMP2P16035 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.13■□□□□ 0.33
TIMP2P16035 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMP2P16035 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 CXCL1P1-201ENST00000502804 216 ntBASIC17.13■□□□□ 0.33
TIMP2P16035 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMP2P16035 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.13■□□□□ 0.33
TIMP2P16035 AC092865.5-201ENST00000545435 363 ntBASIC17.13■□□□□ 0.33
TIMP2P16035 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.13■□□□□ 0.33
TIMP2P16035 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.13■□□□□ 0.33
TIMP2P16035 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.13■□□□□ 0.33
TIMP2P16035 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.13■□□□□ 0.33
TIMP2P16035 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
TIMP2P16035 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TIMP2P16035 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TIMP2P16035 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.13■□□□□ 0.33
TIMP2P16035 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TIMP2P16035 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMP2P16035 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.13■□□□□ 0.33
TIMP2P16035 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIMP2P16035 AC141586.5-201ENST00000624546 2050 ntBASIC17.12■□□□□ 0.33
TIMP2P16035 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TIMP2P16035 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TIMP2P16035 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.12■□□□□ 0.33
TIMP2P16035 BX842568.4-201ENST00000421222 227 ntBASIC17.12■□□□□ 0.33
TIMP2P16035 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.12■□□□□ 0.33
TIMP2P16035 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMP2P16035 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.12■□□□□ 0.33
TIMP2P16035 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TIMP2P16035 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TIMP2P16035 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.12■□□□□ 0.33
TIMP2P16035 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMP2P16035 AC004877.2-201ENST00000623941 599 ntBASIC17.12■□□□□ 0.33
TIMP2P16035 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.12■□□□□ 0.33
TIMP2P16035 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
TIMP2P16035 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TIMP2P16035 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TIMP2P16035 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TIMP2P16035 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIMP2P16035 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.11■□□□□ 0.33
TIMP2P16035 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP2P16035 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP2P16035 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP2P16035 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.11■□□□□ 0.33
TIMP2P16035 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP2P16035 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TIMP2P16035 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP2P16035 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIMP2P16035 YBX2P1-201ENST00000394192 760 ntBASIC17.11■□□□□ 0.33
TIMP2P16035 AC004832.2-201ENST00000426397 482 ntBASIC17.11■□□□□ 0.33
TIMP2P16035 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.11■□□□□ 0.33
TIMP2P16035 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.11■□□□□ 0.33
TIMP2P16035 ACTL9-202ENST00000612068 1252 ntBASIC17.11■□□□□ 0.33
TIMP2P16035 AC006538.3-201ENST00000612495 578 ntBASIC17.11■□□□□ 0.33
TIMP2P16035 AL513190.1-201ENST00000621254 727 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms