Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.77■□□□□ 0.44
BRAFP15056 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.77■□□□□ 0.44
BRAFP15056 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.77■□□□□ 0.44
BRAFP15056 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.77■□□□□ 0.44
BRAFP15056 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
BRAFP15056 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.77■□□□□ 0.44
BRAFP15056 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.77■□□□□ 0.44
BRAFP15056 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.77■□□□□ 0.44
BRAFP15056 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
BRAFP15056 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.77■□□□□ 0.44
BRAFP15056 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
BRAFP15056 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.77■□□□□ 0.44
BRAFP15056 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BRAFP15056 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.77■□□□□ 0.43
BRAFP15056 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
BRAFP15056 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.43
BRAFP15056 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
BRAFP15056 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.77■□□□□ 0.43
BRAFP15056 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
BRAFP15056 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
BRAFP15056 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
BRAFP15056 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.76■□□□□ 0.43
BRAFP15056 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.76■□□□□ 0.43
BRAFP15056 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
BRAFP15056 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.76■□□□□ 0.43
BRAFP15056 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BRAFP15056 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BRAFP15056 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BRAFP15056 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
BRAFP15056 LYSMD4-203ENST00000378904 2122 ntBASIC17.76■□□□□ 0.43
BRAFP15056 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.76■□□□□ 0.43
BRAFP15056 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.76■□□□□ 0.43
BRAFP15056 AC113404.2-201ENST00000507884 177 ntBASIC17.76■□□□□ 0.43
BRAFP15056 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.76■□□□□ 0.43
BRAFP15056 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 AC116353.5-201ENST00000638148 1699 ntBASIC17.76■□□□□ 0.43
BRAFP15056 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
BRAFP15056 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
BRAFP15056 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.76■□□□□ 0.43
BRAFP15056 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.75■□□□□ 0.43
BRAFP15056 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
BRAFP15056 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.75■□□□□ 0.43
BRAFP15056 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.75■□□□□ 0.43
BRAFP15056 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
BRAFP15056 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
BRAFP15056 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.75■□□□□ 0.43
BRAFP15056 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.75■□□□□ 0.43
BRAFP15056 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 TPSP2-201ENST00000561760 610 ntBASIC17.75■□□□□ 0.43
BRAFP15056 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.75■□□□□ 0.43
BRAFP15056 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
BRAFP15056 AC008687.5-201ENST00000593746 558 ntBASIC17.75■□□□□ 0.43
BRAFP15056 AC092329.2-201ENST00000598402 547 ntBASIC17.75■□□□□ 0.43
BRAFP15056 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
BRAFP15056 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.75■□□□□ 0.43
BRAFP15056 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
BRAFP15056 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
BRAFP15056 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms