Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AL096865.1-201ENST00000606796 927 ntBASIC16.19■□□□□ 0.18
CCL4P13236 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CCL4P13236 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.19■□□□□ 0.18
CCL4P13236 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.19■□□□□ 0.18
CCL4P13236 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCL4P13236 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.19■□□□□ 0.18
CCL4P13236 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCL4P13236 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL4P13236 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CCL4P13236 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CCL4P13236 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.18■□□□□ 0.18
CCL4P13236 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.18■□□□□ 0.18
CCL4P13236 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL4P13236 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL4P13236 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL4P13236 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL4P13236 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL4P13236 DUX4L17-201ENST00000557360 1267 ntBASIC16.18■□□□□ 0.18
CCL4P13236 AC243562.1-201ENST00000560672 389 ntBASIC16.18■□□□□ 0.18
CCL4P13236 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL4P13236 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL4P13236 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL4P13236 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 Z92544.3-201ENST00000624747 417 ntBASIC16.18■□□□□ 0.18
CCL4P13236 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.18■□□□□ 0.18
CCL4P13236 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL4P13236 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.18■□□□□ 0.18
CCL4P13236 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL4P13236 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL4P13236 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CCL4P13236 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.18■□□□□ 0.18
CCL4P13236 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCL4P13236 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL4P13236 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.17■□□□□ 0.18
CCL4P13236 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CCL4P13236 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 FAM58DP-201ENST00000428076 619 ntBASIC16.17■□□□□ 0.18
CCL4P13236 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.17■□□□□ 0.18
CCL4P13236 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL4P13236 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 DUX4L27-201ENST00000554796 1261 ntBASIC16.17■□□□□ 0.18
CCL4P13236 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.17■□□□□ 0.18
CCL4P13236 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.17■□□□□ 0.18
CCL4P13236 AL135744.1-201ENST00000565098 629 ntBASIC16.17■□□□□ 0.18
CCL4P13236 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.17■□□□□ 0.18
CCL4P13236 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCL4P13236 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
CCL4P13236 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.17■□□□□ 0.18
CCL4P13236 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCL4P13236 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL4P13236 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL4P13236 AC138932.1-201ENST00000534164 6830 ntBASIC16.16■□□□□ 0.18
CCL4P13236 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CCL4P13236 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.16■□□□□ 0.18
CCL4P13236 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.16■□□□□ 0.18
CCL4P13236 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 AL035633.1-201ENST00000406139 838 ntBASIC16.16■□□□□ 0.18
CCL4P13236 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CCL4P13236 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms