Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC29.76■■■□□ 2.35
TOP2AP11388 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TOP2AP11388 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
TOP2AP11388 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC29.76■■■□□ 2.35
TOP2AP11388 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC29.76■■■□□ 2.35
TOP2AP11388 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC29.76■■■□□ 2.35
TOP2AP11388 SPTLC1P1-201ENST00000447199 261 ntBASIC29.76■■■□□ 2.35
TOP2AP11388 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
TOP2AP11388 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC29.76■■■□□ 2.35
TOP2AP11388 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC29.76■■■□□ 2.35
TOP2AP11388 COQ6-210ENST00000554920 649 ntTSL 3 BASIC29.76■■■□□ 2.35
TOP2AP11388 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC29.76■■■□□ 2.35
TOP2AP11388 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
TOP2AP11388 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TOP2AP11388 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC29.75■■■□□ 2.35
TOP2AP11388 AC116353.5-201ENST00000638148 1699 ntBASIC29.75■■■□□ 2.35
TOP2AP11388 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC29.75■■■□□ 2.35
TOP2AP11388 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TOP2AP11388 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
TOP2AP11388 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC29.75■■■□□ 2.35
TOP2AP11388 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
TOP2AP11388 LINC00896-202ENST00000609602 2128 ntBASIC29.75■■■□□ 2.35
TOP2AP11388 SRP9-204ENST00000619790 377 ntTSL 2 BASIC29.75■■■□□ 2.35
TOP2AP11388 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC29.75■■■□□ 2.35
TOP2AP11388 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC29.75■■■□□ 2.35
TOP2AP11388 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC29.75■■■□□ 2.35
TOP2AP11388 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC29.74■■■□□ 2.35
TOP2AP11388 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC29.74■■■□□ 2.35
TOP2AP11388 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
TOP2AP11388 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC29.74■■■□□ 2.35
TOP2AP11388 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
TOP2AP11388 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
TOP2AP11388 RN7SL692P-201ENST00000464677 288 ntBASIC29.74■■■□□ 2.35
TOP2AP11388 MPDU1-223ENST00000582151 728 ntBASIC29.74■■■□□ 2.35
TOP2AP11388 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC29.74■■■□□ 2.35
TOP2AP11388 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
TOP2AP11388 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
TOP2AP11388 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC29.74■■■□□ 2.35
TOP2AP11388 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TOP2AP11388 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC29.73■■■□□ 2.35
TOP2AP11388 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC29.73■■■□□ 2.35
TOP2AP11388 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
TOP2AP11388 CDK2AP2P3-201ENST00000422476 372 ntBASIC29.73■■■□□ 2.35
TOP2AP11388 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC29.73■■■□□ 2.35
TOP2AP11388 AL844908.2-201ENST00000609461 460 ntBASIC29.73■■■□□ 2.35
TOP2AP11388 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC29.73■■■□□ 2.35
TOP2AP11388 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
TOP2AP11388 AC104581.1-202ENST00000635932 2618 ntBASIC29.73■■■□□ 2.35
TOP2AP11388 FRMD8P1-201ENST00000440433 1524 ntBASIC29.73■■■□□ 2.35
TOP2AP11388 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC29.73■■■□□ 2.35
TOP2AP11388 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
TOP2AP11388 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC29.73■■■□□ 2.35
TOP2AP11388 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TOP2AP11388 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
TOP2AP11388 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TOP2AP11388 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TOP2AP11388 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC29.72■■■□□ 2.35
TOP2AP11388 KRT8P49-201ENST00000604166 1432 ntBASIC29.72■■■□□ 2.35
TOP2AP11388 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TOP2AP11388 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC29.72■■■□□ 2.35
TOP2AP11388 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC29.72■■■□□ 2.35
TOP2AP11388 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC29.72■■■□□ 2.35
TOP2AP11388 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
TOP2AP11388 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC29.72■■■□□ 2.35
TOP2AP11388 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
TOP2AP11388 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
TOP2AP11388 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
TOP2AP11388 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC29.71■■■□□ 2.35
TOP2AP11388 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC29.71■■■□□ 2.35
TOP2AP11388 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
TOP2AP11388 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
TOP2AP11388 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC29.71■■■□□ 2.35
TOP2AP11388 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC29.71■■■□□ 2.35
TOP2AP11388 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
TOP2AP11388 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC29.71■■■□□ 2.35
TOP2AP11388 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC29.71■■■□□ 2.35
TOP2AP11388 EDF1-203ENST00000371649 790 ntTSL 2 BASIC29.71■■■□□ 2.35
TOP2AP11388 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC29.71■■■□□ 2.35
TOP2AP11388 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC29.71■■■□□ 2.35
TOP2AP11388 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC29.71■■■□□ 2.35
TOP2AP11388 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC29.71■■■□□ 2.35
TOP2AP11388 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC29.7■■■□□ 2.35
TOP2AP11388 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
TOP2AP11388 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC29.7■■■□□ 2.35
TOP2AP11388 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
TOP2AP11388 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TOP2AP11388 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC29.7■■■□□ 2.35
TOP2AP11388 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.35
TOP2AP11388 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
TOP2AP11388 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
TOP2AP11388 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
TOP2AP11388 AP3S2-216ENST00000617003 1561 ntBASIC29.7■■■□□ 2.34
TOP2AP11388 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
TOP2AP11388 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
TOP2AP11388 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC29.7■■■□□ 2.34
TOP2AP11388 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC29.7■■■□□ 2.34
TOP2AP11388 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC29.7■■■□□ 2.34
TOP2AP11388 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC29.7■■■□□ 2.34
TOP2AP11388 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC29.7■■■□□ 2.34
TOP2AP11388 AC018529.1-201ENST00000613063 361 ntBASIC29.7■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms