Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HLA-DPB1P04440 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 AC026691.1-201ENST00000602502 2017 ntBASIC15.55■□□□□ 0.08
HLA-DPB1P04440 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 FAM8A6P-201ENST00000407496 1135 ntBASIC15.55■□□□□ 0.08
HLA-DPB1P04440 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.55■□□□□ 0.08
HLA-DPB1P04440 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 AL391005.1-201ENST00000623953 2435 ntBASIC15.55■□□□□ 0.08
HLA-DPB1P04440 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HLA-DPB1P04440 AC008741.2-201ENST00000612792 3115 ntBASIC15.54■□□□□ 0.08
HLA-DPB1P04440 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 LINC01238-205ENST00000567549 1107 ntBASIC15.54■□□□□ 0.08
HLA-DPB1P04440 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HLA-DPB1P04440 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 BX276092.7-203ENST00000637198 1536 ntBASIC15.53■□□□□ 0.08
HLA-DPB1P04440 LINC02199-201ENST00000506655 2702 ntBASIC15.53■□□□□ 0.08
HLA-DPB1P04440 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 AC006449.5-201ENST00000610658 2098 ntBASIC15.53■□□□□ 0.08
HLA-DPB1P04440 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.53■□□□□ 0.08
HLA-DPB1P04440 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms