Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VAPBO95292 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.36■□□□□ 0.37
VAPBO95292 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.36■□□□□ 0.37
VAPBO95292 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
VAPBO95292 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
VAPBO95292 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.36■□□□□ 0.37
VAPBO95292 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VAPBO95292 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.36■□□□□ 0.37
VAPBO95292 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
VAPBO95292 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.36■□□□□ 0.37
VAPBO95292 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
VAPBO95292 MIR1224-201ENST00000408193 85 ntBASIC17.36■□□□□ 0.37
VAPBO95292 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.36■□□□□ 0.37
VAPBO95292 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.36■□□□□ 0.37
VAPBO95292 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.36■□□□□ 0.37
VAPBO95292 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.36■□□□□ 0.37
VAPBO95292 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 AC099336.1-202ENST00000602961 463 ntBASIC17.36■□□□□ 0.37
VAPBO95292 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.36■□□□□ 0.37
VAPBO95292 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.36■□□□□ 0.37
VAPBO95292 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.36■□□□□ 0.37
VAPBO95292 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.36■□□□□ 0.37
VAPBO95292 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.36■□□□□ 0.37
VAPBO95292 PMPCAP1-201ENST00000508114 1576 ntBASIC17.36■□□□□ 0.37
VAPBO95292 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
VAPBO95292 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
VAPBO95292 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.35■□□□□ 0.37
VAPBO95292 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.35■□□□□ 0.37
VAPBO95292 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.35■□□□□ 0.37
VAPBO95292 POM121L3P-201ENST00000419331 1163 ntBASIC17.35■□□□□ 0.37
VAPBO95292 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
VAPBO95292 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.35■□□□□ 0.37
VAPBO95292 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.35■□□□□ 0.37
VAPBO95292 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.35■□□□□ 0.37
VAPBO95292 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.35■□□□□ 0.37
VAPBO95292 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.35■□□□□ 0.37
VAPBO95292 AC093458.2-201ENST00000623150 629 ntBASIC17.35■□□□□ 0.37
VAPBO95292 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
VAPBO95292 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
VAPBO95292 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
VAPBO95292 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VAPBO95292 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
VAPBO95292 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VAPBO95292 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
VAPBO95292 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.34■□□□□ 0.37
VAPBO95292 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.34■□□□□ 0.37
VAPBO95292 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.34■□□□□ 0.37
VAPBO95292 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
VAPBO95292 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.34■□□□□ 0.37
VAPBO95292 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.34■□□□□ 0.37
VAPBO95292 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 AC005915.1-201ENST00000624912 2018 ntBASIC17.34■□□□□ 0.37
VAPBO95292 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.34■□□□□ 0.37
VAPBO95292 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
VAPBO95292 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VAPBO95292 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VAPBO95292 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
VAPBO95292 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.33■□□□□ 0.37
VAPBO95292 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.33■□□□□ 0.37
VAPBO95292 EGFEM1P-202ENST00000431685 1563 ntBASIC17.33■□□□□ 0.37
VAPBO95292 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms