Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.9■□□□□ 0.14
NKX2-2O95096 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
NKX2-2O95096 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
NKX2-2O95096 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
NKX2-2O95096 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.14
NKX2-2O95096 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX2-2O95096 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC15.89■□□□□ 0.13
NKX2-2O95096 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX2-2O95096 EMBP1-201ENST00000458200 901 ntBASIC15.89■□□□□ 0.13
NKX2-2O95096 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX2-2O95096 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX2-2O95096 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 AC004706.3-202ENST00000621574 984 ntBASIC15.89■□□□□ 0.13
NKX2-2O95096 PCDHA12-202ENST00000613593 2588 ntBASIC15.89■□□□□ 0.13
NKX2-2O95096 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX2-2O95096 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.89■□□□□ 0.13
NKX2-2O95096 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.89■□□□□ 0.13
NKX2-2O95096 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
NKX2-2O95096 AC092068.3-201ENST00000587894 2016 ntBASIC15.89■□□□□ 0.13
NKX2-2O95096 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.89■□□□□ 0.13
NKX2-2O95096 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
NKX2-2O95096 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.88■□□□□ 0.13
NKX2-2O95096 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NKX2-2O95096 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NKX2-2O95096 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX2-2O95096 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX2-2O95096 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX2-2O95096 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX2-2O95096 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.88■□□□□ 0.13
NKX2-2O95096 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.88■□□□□ 0.13
NKX2-2O95096 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.88■□□□□ 0.13
NKX2-2O95096 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.88■□□□□ 0.13
NKX2-2O95096 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.88■□□□□ 0.13
NKX2-2O95096 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NKX2-2O95096 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX2-2O95096 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NKX2-2O95096 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.88■□□□□ 0.13
NKX2-2O95096 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX2-2O95096 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
NKX2-2O95096 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.88■□□□□ 0.13
NKX2-2O95096 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
NKX2-2O95096 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NKX2-2O95096 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NKX2-2O95096 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NKX2-2O95096 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 AC105020.1-201ENST00000435356 2205 ntBASIC15.87■□□□□ 0.13
NKX2-2O95096 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NKX2-2O95096 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
NKX2-2O95096 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX2-2O95096 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX2-2O95096 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.87■□□□□ 0.13
NKX2-2O95096 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.87■□□□□ 0.13
NKX2-2O95096 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NKX2-2O95096 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.87■□□□□ 0.13
NKX2-2O95096 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.87■□□□□ 0.13
NKX2-2O95096 LAGE3P1-201ENST00000425356 484 ntBASIC15.87■□□□□ 0.13
NKX2-2O95096 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms