Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
UPK1BO75841 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.04■□□□□ -0
UPK1BO75841 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.04■□□□□ -0
UPK1BO75841 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UPK1BO75841 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.04■□□□□ -0
UPK1BO75841 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
UPK1BO75841 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UPK1BO75841 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
UPK1BO75841 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UPK1BO75841 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.03■□□□□ -0
UPK1BO75841 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.03■□□□□ -0
UPK1BO75841 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
UPK1BO75841 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.03■□□□□ -0
UPK1BO75841 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.03■□□□□ -0
UPK1BO75841 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.03■□□□□ -0
UPK1BO75841 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.03■□□□□ -0
UPK1BO75841 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.03■□□□□ -0
UPK1BO75841 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC15.03■□□□□ -0
UPK1BO75841 NTF6G-201ENST00000591094 616 ntBASIC15.03■□□□□ -0
UPK1BO75841 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UPK1BO75841 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.03■□□□□ -0
UPK1BO75841 AL596087.1-201ENST00000400979 1969 ntBASIC15.03■□□□□ -0
UPK1BO75841 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.03■□□□□ -0
UPK1BO75841 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
UPK1BO75841 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
UPK1BO75841 PPT1-215ENST00000641471 2368 ntBASIC15.03■□□□□ -0
UPK1BO75841 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.03■□□□□ -0
UPK1BO75841 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
UPK1BO75841 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.02■□□□□ -0
UPK1BO75841 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
UPK1BO75841 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
UPK1BO75841 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.02■□□□□ -0
UPK1BO75841 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
UPK1BO75841 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
UPK1BO75841 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
UPK1BO75841 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.02■□□□□ -0
UPK1BO75841 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.02■□□□□ -0
UPK1BO75841 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.02■□□□□ -0
UPK1BO75841 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.02■□□□□ -0
UPK1BO75841 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.02■□□□□ -0
UPK1BO75841 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
UPK1BO75841 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC15.02■□□□□ -0
UPK1BO75841 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.02■□□□□ -0
UPK1BO75841 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
UPK1BO75841 MIR3180-5-201ENST00000583743 153 ntBASIC15.02■□□□□ -0
UPK1BO75841 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
UPK1BO75841 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.02■□□□□ -0
UPK1BO75841 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.02□□□□□ -0.01
UPK1BO75841 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
UPK1BO75841 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.02□□□□□ -0.01
UPK1BO75841 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
UPK1BO75841 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
UPK1BO75841 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.02□□□□□ -0.01
UPK1BO75841 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.02□□□□□ -0.01
UPK1BO75841 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
UPK1BO75841 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.02□□□□□ -0.01
UPK1BO75841 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
UPK1BO75841 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
UPK1BO75841 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms