Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.12□□□□□ -0.15
SSSCA1O60232 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 AC007950.2-201ENST00000615045 2347 ntBASIC14.12□□□□□ -0.15
SSSCA1O60232 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SSSCA1O60232 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SSSCA1O60232 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
SSSCA1O60232 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.11□□□□□ -0.15
SSSCA1O60232 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC14.11□□□□□ -0.15
SSSCA1O60232 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.11□□□□□ -0.15
SSSCA1O60232 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SSSCA1O60232 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SSSCA1O60232 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.11□□□□□ -0.15
SSSCA1O60232 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 SLC25A1P3-201ENST00000395415 828 ntBASIC14.11□□□□□ -0.15
SSSCA1O60232 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SSSCA1O60232 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SSSCA1O60232 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.11□□□□□ -0.15
SSSCA1O60232 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.11□□□□□ -0.15
SSSCA1O60232 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.11□□□□□ -0.15
SSSCA1O60232 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 AL359736.2-201ENST00000621992 437 ntBASIC14.11□□□□□ -0.15
SSSCA1O60232 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SSSCA1O60232 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SSSCA1O60232 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC14.11□□□□□ -0.15
SSSCA1O60232 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
SSSCA1O60232 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SSSCA1O60232 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.11□□□□□ -0.15
SSSCA1O60232 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.1□□□□□ -0.15
SSSCA1O60232 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 AC007663.1-201ENST00000438948 1240 ntBASIC14.1□□□□□ -0.15
SSSCA1O60232 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.1□□□□□ -0.15
SSSCA1O60232 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SSSCA1O60232 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.1□□□□□ -0.15
SSSCA1O60232 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SSSCA1O60232 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms