Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ACTN4O43707 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.35■□□□□ 0.69
ACTN4O43707 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.35■□□□□ 0.69
ACTN4O43707 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.35■□□□□ 0.69
ACTN4O43707 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ACTN4O43707 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
ACTN4O43707 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.35■□□□□ 0.69
ACTN4O43707 SPDYE21P-201ENST00000413323 827 ntBASIC19.35■□□□□ 0.69
ACTN4O43707 ATP5G2P1-201ENST00000433580 426 ntBASIC19.35■□□□□ 0.69
ACTN4O43707 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.35■□□□□ 0.69
ACTN4O43707 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.35■□□□□ 0.69
ACTN4O43707 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.35■□□□□ 0.69
ACTN4O43707 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ACTN4O43707 AC069148.1-201ENST00000608741 768 ntBASIC19.35■□□□□ 0.69
ACTN4O43707 AC092119.3-201ENST00000612618 583 ntBASIC19.35■□□□□ 0.69
ACTN4O43707 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.35■□□□□ 0.69
ACTN4O43707 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ACTN4O43707 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.35■□□□□ 0.69
ACTN4O43707 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ACTN4O43707 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.35■□□□□ 0.69
ACTN4O43707 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ACTN4O43707 GPR89P-201ENST00000407924 1495 ntBASIC19.35■□□□□ 0.69
ACTN4O43707 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ACTN4O43707 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
ACTN4O43707 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ACTN4O43707 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.34■□□□□ 0.69
ACTN4O43707 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ACTN4O43707 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ACTN4O43707 POM121L3P-201ENST00000419331 1163 ntBASIC19.34■□□□□ 0.69
ACTN4O43707 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACTN4O43707 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.34■□□□□ 0.69
ACTN4O43707 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ACTN4O43707 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACTN4O43707 AC012615.1-201ENST00000565797 1299 ntBASIC19.34■□□□□ 0.69
ACTN4O43707 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.34■□□□□ 0.69
ACTN4O43707 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.34■□□□□ 0.69
ACTN4O43707 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.34■□□□□ 0.69
ACTN4O43707 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.34■□□□□ 0.69
ACTN4O43707 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACTN4O43707 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ACTN4O43707 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.34■□□□□ 0.69
ACTN4O43707 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ACTN4O43707 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.34■□□□□ 0.69
ACTN4O43707 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ACTN4O43707 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ACTN4O43707 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
ACTN4O43707 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ACTN4O43707 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACTN4O43707 UBALD1-205ENST00000590891 2641 ntBASIC19.33■□□□□ 0.69
ACTN4O43707 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ACTN4O43707 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ACTN4O43707 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.33■□□□□ 0.68
ACTN4O43707 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACTN4O43707 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ACTN4O43707 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACTN4O43707 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACTN4O43707 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.33■□□□□ 0.68
ACTN4O43707 AC104819.1-201ENST00000504587 486 ntBASIC19.33■□□□□ 0.68
ACTN4O43707 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.33■□□□□ 0.68
ACTN4O43707 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACTN4O43707 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.33■□□□□ 0.68
ACTN4O43707 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ACTN4O43707 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACTN4O43707 AC004817.3-201ENST00000602957 2129 ntBASIC19.33■□□□□ 0.68
ACTN4O43707 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.33■□□□□ 0.68
ACTN4O43707 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ACTN4O43707 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC19.33■□□□□ 0.68
ACTN4O43707 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ACTN4O43707 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ACTN4O43707 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.32■□□□□ 0.68
ACTN4O43707 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
ACTN4O43707 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.32■□□□□ 0.68
ACTN4O43707 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ACTN4O43707 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.32■□□□□ 0.68
ACTN4O43707 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.32■□□□□ 0.68
ACTN4O43707 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
ACTN4O43707 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ACTN4O43707 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
ACTN4O43707 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms