Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF13O43567 FAM220CP-201ENST00000395253 831 ntBASIC15.74■□□□□ 0.11
RNF13O43567 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF13O43567 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF13O43567 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF13O43567 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.74■□□□□ 0.11
RNF13O43567 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
RNF13O43567 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
RNF13O43567 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF13O43567 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
RNF13O43567 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.74■□□□□ 0.11
RNF13O43567 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF13O43567 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF13O43567 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
RNF13O43567 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF13O43567 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 AC103564.2-201ENST00000432853 1299 ntBASIC15.73■□□□□ 0.11
RNF13O43567 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF13O43567 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.73■□□□□ 0.11
RNF13O43567 AC122714.2-201ENST00000502787 707 ntBASIC15.73■□□□□ 0.11
RNF13O43567 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF13O43567 AC009533.2-201ENST00000543664 586 ntBASIC15.73■□□□□ 0.11
RNF13O43567 AC111152.3-201ENST00000569699 673 ntBASIC15.73■□□□□ 0.11
RNF13O43567 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RNF13O43567 Z69720.1-201ENST00000601483 472 ntBASIC15.73■□□□□ 0.11
RNF13O43567 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF13O43567 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF13O43567 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF13O43567 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RNF13O43567 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF13O43567 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
RNF13O43567 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF13O43567 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF13O43567 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF13O43567 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF13O43567 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 AC060834.1-201ENST00000443027 2032 ntBASIC15.72■□□□□ 0.11
RNF13O43567 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RNF13O43567 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RNF13O43567 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
RNF13O43567 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.72■□□□□ 0.11
RNF13O43567 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF13O43567 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
RNF13O43567 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF13O43567 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
RNF13O43567 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF13O43567 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF13O43567 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.72■□□□□ 0.11
RNF13O43567 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF13O43567 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RNF13O43567 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF13O43567 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF13O43567 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RNF13O43567 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF13O43567 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
RNF13O43567 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF13O43567 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RNF13O43567 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RNF13O43567 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF13O43567 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms