Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 HLA-A-209ENST00000638375 975 ntBASIC14.58□□□□□ -0.08
TSPAN4O14817 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TSPAN4O14817 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.58□□□□□ -0.08
TSPAN4O14817 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TSPAN4O14817 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.58□□□□□ -0.08
TSPAN4O14817 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TSPAN4O14817 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.58□□□□□ -0.08
TSPAN4O14817 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TSPAN4O14817 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 OR2I1P-210ENST00000642037 4691 ntBASIC14.57□□□□□ -0.08
TSPAN4O14817 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.57□□□□□ -0.08
TSPAN4O14817 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.57□□□□□ -0.08
TSPAN4O14817 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TSPAN4O14817 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TSPAN4O14817 AC093677.2-201ENST00000600169 1863 ntBASIC14.57□□□□□ -0.08
TSPAN4O14817 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TSPAN4O14817 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.57□□□□□ -0.08
TSPAN4O14817 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.57□□□□□ -0.08
TSPAN4O14817 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 RPS2P4-201ENST00000476944 856 ntBASIC14.57□□□□□ -0.08
TSPAN4O14817 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TSPAN4O14817 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.57□□□□□ -0.08
TSPAN4O14817 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC14.57□□□□□ -0.08
TSPAN4O14817 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.57□□□□□ -0.08
TSPAN4O14817 Z99916.2-201ENST00000604037 246 ntBASIC14.57□□□□□ -0.08
TSPAN4O14817 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC14.57□□□□□ -0.08
TSPAN4O14817 AL049637.2-201ENST00000641778 930 ntBASIC14.57□□□□□ -0.08
TSPAN4O14817 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TSPAN4O14817 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.57□□□□□ -0.08
TSPAN4O14817 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.57□□□□□ -0.08
TSPAN4O14817 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.57□□□□□ -0.08
TSPAN4O14817 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TSPAN4O14817 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.57□□□□□ -0.08
TSPAN4O14817 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 KRT16P1-201ENST00000399124 1418 ntBASIC14.57□□□□□ -0.08
TSPAN4O14817 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.57□□□□□ -0.08
TSPAN4O14817 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TSPAN4O14817 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.56□□□□□ -0.08
TSPAN4O14817 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TSPAN4O14817 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.56□□□□□ -0.08
TSPAN4O14817 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.56□□□□□ -0.08
TSPAN4O14817 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.56□□□□□ -0.08
TSPAN4O14817 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TSPAN4O14817 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TSPAN4O14817 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.56□□□□□ -0.08
TSPAN4O14817 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
TSPAN4O14817 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.56□□□□□ -0.08
TSPAN4O14817 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TSPAN4O14817 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.56□□□□□ -0.08
TSPAN4O14817 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.56□□□□□ -0.08
TSPAN4O14817 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms