Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LYRM9A8MSI8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LYRM9A8MSI8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.31□□□□□ -0.44
LYRM9A8MSI8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LYRM9A8MSI8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LYRM9A8MSI8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.31□□□□□ -0.44
LYRM9A8MSI8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.31□□□□□ -0.44
LYRM9A8MSI8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
LYRM9A8MSI8 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC12.31□□□□□ -0.44
LYRM9A8MSI8 EGFEM1P-202ENST00000431685 1563 ntBASIC12.3□□□□□ -0.44
LYRM9A8MSI8 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 AC026396.1-201ENST00000419388 421 ntBASIC12.3□□□□□ -0.44
LYRM9A8MSI8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 SLC25A6P4-201ENST00000586535 553 ntBASIC12.3□□□□□ -0.44
LYRM9A8MSI8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 AL121894.2-201ENST00000602977 491 ntBASIC12.3□□□□□ -0.44
LYRM9A8MSI8 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 FAM215A-202ENST00000632077 792 ntBASIC12.3□□□□□ -0.44
LYRM9A8MSI8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC12.3□□□□□ -0.44
LYRM9A8MSI8 CROCCP2-202ENST00000412962 2773 ntBASIC12.3□□□□□ -0.44
LYRM9A8MSI8 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 AP002414.1-201ENST00000391405 1147 ntBASIC12.29□□□□□ -0.44
LYRM9A8MSI8 KRT18P27-201ENST00000427733 1299 ntBASIC12.29□□□□□ -0.44
LYRM9A8MSI8 AC009078.2-202ENST00000463353 338 ntBASIC12.29□□□□□ -0.44
LYRM9A8MSI8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 GGTLC5P-201ENST00000617623 998 ntBASIC12.29□□□□□ -0.44
LYRM9A8MSI8 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 AL805961.1-202ENST00000641562 540 ntBASIC12.29□□□□□ -0.44
LYRM9A8MSI8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
LYRM9A8MSI8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms