Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 SIGLEC16-201ENST00000599858 1437 ntBASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC162PA2VCL2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 AC004817.3-201ENST00000602957 2129 ntBASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 AC106795.1-205ENST00000512851 1056 ntBASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 AC091304.2-201ENST00000564639 760 ntBASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 CLEC4GP1-201ENST00000596555 870 ntBASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CCDC162PA2VCL2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CCDC162PA2VCL2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 EGFEM1P-202ENST00000431685 1563 ntBASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 AD000864.1-201ENST00000624076 2295 ntBASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCDC162PA2VCL2 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC162PA2VCL2 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms