Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 CICP23-201ENST00000605013 2741 ntBASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC8.9□□□□□ -0.98
LINC01558Q9Y6Z2 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 APP-205ENST00000358918 2366 ntTSL 5 BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
LINC01558Q9Y6Z2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 AL390755.1-201ENST00000623716 2027 ntBASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 AC092437.1-201ENST00000624794 1048 ntBASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
LINC01558Q9Y6Z2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms