Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 AL445228.2-201ENST00000605589 952 ntBASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
R3HCC1Q9Y3T6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 KRT18P38-201ENST00000449496 1282 ntBASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 AL136038.4-201ENST00000603606 1261 ntBASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
R3HCC1Q9Y3T6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 PVRIG2P-201ENST00000435460 978 ntBASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.83■□□□□ 0.77
R3HCC1Q9Y3T6 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
R3HCC1Q9Y3T6 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 AC008687.5-201ENST00000593746 558 ntBASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
R3HCC1Q9Y3T6 AL138688.1-201ENST00000624851 1594 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms