Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 AL358472.5-202ENST00000641448 1267 ntBASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
SLC52A1Q9NWF4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC24.44■■□□□ 1.5
SLC52A1Q9NWF4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 AC142381.1-201ENST00000426099 345 ntBASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 AC027307.3-201ENST00000594262 1100 ntBASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 AL590560.3-201ENST00000623350 461 ntBASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 AC016027.1-202ENST00000607927 1699 ntBASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SLC52A1Q9NWF4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 PIN1P1-201ENST00000412108 996 ntBASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 AC009118.2-201ENST00000613275 655 ntBASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 AC073592.8-201ENST00000624126 511 ntBASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 AC025048.6-201ENST00000634326 1161 ntBASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 AC098818.2-201ENST00000564925 2320 ntBASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 AC100757.3-201ENST00000622361 1406 ntBASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SLC52A1Q9NWF4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 AL138918.1-201ENST00000568306 659 ntBASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 AC120498.9-201ENST00000339021 3867 ntBASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC52A1Q9NWF4 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SLC52A1Q9NWF4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms