Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 AL031432.2-201ENST00000566714 459 ntBASIC20.7■□□□□ 0.9
SALL1Q9NSC2 AL928711.1-201ENST00000570165 459 ntBASIC20.7■□□□□ 0.9
SALL1Q9NSC2 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SALL1Q9NSC2 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 AC068137.2-201ENST00000605408 478 ntBASIC20.69■□□□□ 0.9
SALL1Q9NSC2 AC091812.2-201ENST00000619081 385 ntBASIC20.69■□□□□ 0.9
SALL1Q9NSC2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC20.69■□□□□ 0.9
SALL1Q9NSC2 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 PMS2P2-201ENST00000425039 1128 ntBASIC20.68■□□□□ 0.9
SALL1Q9NSC2 FAM58CP-201ENST00000435741 640 ntBASIC20.68■□□□□ 0.9
SALL1Q9NSC2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 REXO1L3P-201ENST00000622202 1288 ntBASIC20.68■□□□□ 0.9
SALL1Q9NSC2 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.68■□□□□ 0.9
SALL1Q9NSC2 AC020916.1-201ENST00000587762 1774 ntBASIC20.67■□□□□ 0.9
SALL1Q9NSC2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 CEND1P1-201ENST00000451006 455 ntBASIC20.67■□□□□ 0.9
SALL1Q9NSC2 AL513480.1-201ENST00000451731 511 ntBASIC20.67■□□□□ 0.9
SALL1Q9NSC2 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 AP002472.1-201ENST00000577490 586 ntBASIC20.67■□□□□ 0.9
SALL1Q9NSC2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 AC092902.6-201ENST00000641783 218 ntBASIC20.67■□□□□ 0.9
SALL1Q9NSC2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SALL1Q9NSC2 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 SLC25A1P3-201ENST00000395415 828 ntBASIC20.66■□□□□ 0.9
SALL1Q9NSC2 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms