Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 VENTXP7-201ENST00000475503 772 ntBASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 AC009533.2-201ENST00000543664 586 ntBASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 AC116407.4-201ENST00000623319 1061 ntBASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 RNF216P1-203ENST00000404404 2427 ntBASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 KRT18P1-202ENST00000452408 1331 ntBASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.74■□□□□ 0.59
NLRC4Q9NPP4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 STK19B-204ENST00000512515 211 ntBASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 AL135999.2-201ENST00000622438 1686 ntBASIC18.73■□□□□ 0.59
NLRC4Q9NPP4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 AC132938.5-201ENST00000624980 1813 ntBASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 AC233702.3-201ENST00000578656 1387 ntBASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 TSSC2-201ENST00000450217 709 ntBASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 AC011467.2-201ENST00000598425 242 ntBASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.72■□□□□ 0.59
NLRC4Q9NPP4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 TP73-AS1-210ENST00000637775 1455 ntBASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
NLRC4Q9NPP4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms