Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 AC009336.1-201ENST00000608941 1553 ntBASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRTM1Q9HBL6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 AC011467.2-201ENST00000598425 242 ntBASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 FLJ38576-201ENST00000623820 2459 ntBASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 AC005332.1-201ENST00000577698 1310 ntBASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 AL135999.2-201ENST00000622438 1686 ntBASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.62■□□□□ 0.25
LRTM1Q9HBL6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 AC003669.1-201ENST00000334569 611 ntBASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 AC016734.2-201ENST00000624325 1377 ntBASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 PCDHA14-201ENST00000506751 2298 ntBASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRTM1Q9HBL6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRTM1Q9HBL6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms