Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 IL9RP2-201ENST00000423948 1312 ntBASIC20.33■□□□□ 0.85
RNF41Q9H4P4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 AF228730.7-201ENST00000641842 219 ntBASIC20.33■□□□□ 0.85
RNF41Q9H4P4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RNF41Q9H4P4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RNF41Q9H4P4 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.32■□□□□ 0.84
RNF41Q9H4P4 IGHV3-65-201ENST00000523210 341 ntBASIC20.32■□□□□ 0.84
RNF41Q9H4P4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 GGTLC5P-201ENST00000617623 998 ntBASIC20.32■□□□□ 0.84
RNF41Q9H4P4 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RNF41Q9H4P4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 LINC02012-201ENST00000608206 1725 ntBASIC20.31■□□□□ 0.84
RNF41Q9H4P4 PI4KAP1-204ENST00000612579 1703 ntBASIC20.31■□□□□ 0.84
RNF41Q9H4P4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 AC120114.3-201ENST00000611923 658 ntBASIC20.31■□□□□ 0.84
RNF41Q9H4P4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
RNF41Q9H4P4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.3■□□□□ 0.84
RNF41Q9H4P4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RNF41Q9H4P4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms