Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 AC068587.6-202ENST00000641839 5619 ntBASIC14.04□□□□□ -0.16
RAB40CQ96S21 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 PRR31-201ENST00000371629 978 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 AL512604.3-201ENST00000569583 964 ntBASIC14.04□□□□□ -0.16
RAB40CQ96S21 AC024563.2-201ENST00000603282 481 ntBASIC14.04□□□□□ -0.16
RAB40CQ96S21 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 AC011270.2-201ENST00000624293 2550 ntBASIC14.04□□□□□ -0.16
RAB40CQ96S21 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RAB40CQ96S21 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB40CQ96S21 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 MYCLP1-201ENST00000372451 1075 ntBASIC14.03□□□□□ -0.16
RAB40CQ96S21 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 AC009947.2-201ENST00000444014 672 ntBASIC14.03□□□□□ -0.16
RAB40CQ96S21 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 AL355075.4-201ENST00000554988 638 ntBASIC14.03□□□□□ -0.16
RAB40CQ96S21 C2orf69P3-201ENST00000565542 1120 ntBASIC14.03□□□□□ -0.16
RAB40CQ96S21 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 NEK4P2-201ENST00000580004 1012 ntBASIC14.03□□□□□ -0.16
RAB40CQ96S21 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 AP000525.1-201ENST00000608286 694 ntBASIC14.03□□□□□ -0.16
RAB40CQ96S21 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
RAB40CQ96S21 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB40CQ96S21 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms