Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 AL603756.1-201ENST00000606511 2163 ntBASIC12.53□□□□□ -0.4
C9orf85Q96MD7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 AC003669.1-201ENST00000334569 611 ntBASIC12.53□□□□□ -0.4
C9orf85Q96MD7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 KRT8P26-201ENST00000534154 1276 ntBASIC12.53□□□□□ -0.4
C9orf85Q96MD7 AC009533.2-201ENST00000543664 586 ntBASIC12.53□□□□□ -0.4
C9orf85Q96MD7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 AC011498.5-201ENST00000592027 486 ntBASIC12.53□□□□□ -0.4
C9orf85Q96MD7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
C9orf85Q96MD7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 RNF216P1-203ENST00000404404 2427 ntBASIC12.52□□□□□ -0.4
C9orf85Q96MD7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
C9orf85Q96MD7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 AC211429.1-201ENST00000415277 523 ntBASIC12.52□□□□□ -0.41
C9orf85Q96MD7 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 GPR89P-201ENST00000407924 1495 ntBASIC12.52□□□□□ -0.41
C9orf85Q96MD7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 FRMD8P1-201ENST00000440433 1524 ntBASIC12.52□□□□□ -0.41
C9orf85Q96MD7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.52□□□□□ -0.41
C9orf85Q96MD7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
C9orf85Q96MD7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms