Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 KRT18P31-201ENST00000506277 1292 ntBASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 AL139288.1-201ENST00000623748 933 ntBASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 AL022326.1-202ENST00000641533 845 ntBASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.85■□□□□ 0.29
PDLIM5Q96HC4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 AP002414.1-201ENST00000391405 1147 ntBASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 AL353135.1-201ENST00000606729 504 ntBASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 AC138932.1-201ENST00000534164 6830 ntBASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.84■□□□□ 0.29
PDLIM5Q96HC4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
PDLIM5Q96HC4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
PDLIM5Q96HC4 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.29
PDLIM5Q96HC4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PDLIM5Q96HC4 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PDLIM5Q96HC4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 DUX4L17-201ENST00000557360 1267 ntBASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 NKAPP1-205ENST00000585790 367 ntBASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 AL355877.3-201ENST00000622820 899 ntBASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PDLIM5Q96HC4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PDLIM5Q96HC4 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms