Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RTP4Q96DX8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
RTP4Q96DX8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 ABCD1P5-201ENST00000445663 754 ntBASIC17.59■□□□□ 0.41
RTP4Q96DX8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 AP000867.3-201ENST00000524675 377 ntBASIC17.59■□□□□ 0.41
RTP4Q96DX8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 DUX4L17-201ENST00000557360 1267 ntBASIC17.59■□□□□ 0.41
RTP4Q96DX8 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RTP4Q96DX8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 AC004817.3-201ENST00000602957 2129 ntBASIC17.59■□□□□ 0.41
RTP4Q96DX8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RTP4Q96DX8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
RTP4Q96DX8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RTP4Q96DX8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
RTP4Q96DX8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RTP4Q96DX8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 PCDHA14-201ENST00000506751 2298 ntBASIC17.58■□□□□ 0.4
RTP4Q96DX8 AC079776.2-201ENST00000641154 1609 ntBASIC17.58■□□□□ 0.4
RTP4Q96DX8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RTP4Q96DX8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RTP4Q96DX8 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 FAAHP1-202ENST00000446499 1238 ntBASIC17.57■□□□□ 0.4
RTP4Q96DX8 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 MIR5100-201ENST00000579544 119 ntBASIC17.57■□□□□ 0.4
RTP4Q96DX8 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.57■□□□□ 0.4
RTP4Q96DX8 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms