Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS3Q969F9 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.13■□□□□ 0.65
HPS3Q969F9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS3Q969F9 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
HPS3Q969F9 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HPS3Q969F9 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
HPS3Q969F9 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HPS3Q969F9 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS3Q969F9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.12■□□□□ 0.65
HPS3Q969F9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.12■□□□□ 0.65
HPS3Q969F9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
HPS3Q969F9 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HPS3Q969F9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.12■□□□□ 0.65
HPS3Q969F9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.12■□□□□ 0.65
HPS3Q969F9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS3Q969F9 DUSP5P1-201ENST00000441325 1139 ntBASIC19.12■□□□□ 0.65
HPS3Q969F9 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.12■□□□□ 0.65
HPS3Q969F9 AF238378.1-201ENST00000526806 358 ntBASIC19.12■□□□□ 0.65
HPS3Q969F9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.12■□□□□ 0.65
HPS3Q969F9 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 SART3-203ENST00000546611 1184 ntBASIC19.12■□□□□ 0.65
HPS3Q969F9 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.12■□□□□ 0.65
HPS3Q969F9 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.12■□□□□ 0.65
HPS3Q969F9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HPS3Q969F9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.12■□□□□ 0.65
HPS3Q969F9 AC064862.7-201ENST00000604520 867 ntBASIC19.12■□□□□ 0.65
HPS3Q969F9 AC084018.2-201ENST00000613093 2607 ntBASIC19.12■□□□□ 0.65
HPS3Q969F9 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS3Q969F9 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.12■□□□□ 0.65
HPS3Q969F9 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HPS3Q969F9 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HPS3Q969F9 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HPS3Q969F9 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HPS3Q969F9 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.11■□□□□ 0.65
HPS3Q969F9 FGFR3P6-201ENST00000457012 610 ntBASIC19.11■□□□□ 0.65
HPS3Q969F9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.11■□□□□ 0.65
HPS3Q969F9 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HPS3Q969F9 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC19.11■□□□□ 0.65
HPS3Q969F9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.11■□□□□ 0.65
HPS3Q969F9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.11■□□□□ 0.65
HPS3Q969F9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.11■□□□□ 0.65
HPS3Q969F9 IFNL4P1-201ENST00000607083 540 ntBASIC19.11■□□□□ 0.65
HPS3Q969F9 REXO1L6P-202ENST00000619970 1078 ntBASIC19.11■□□□□ 0.65
HPS3Q969F9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.11■□□□□ 0.65
HPS3Q969F9 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HPS3Q969F9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 RNF216P1-203ENST00000404404 2427 ntBASIC19.11■□□□□ 0.65
HPS3Q969F9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.11■□□□□ 0.65
HPS3Q969F9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.11■□□□□ 0.65
HPS3Q969F9 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HPS3Q969F9 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HPS3Q969F9 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 AC105020.1-201ENST00000435356 2205 ntBASIC19.1■□□□□ 0.65
HPS3Q969F9 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS3Q969F9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS3Q969F9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.1■□□□□ 0.65
HPS3Q969F9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.1■□□□□ 0.65
HPS3Q969F9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS3Q969F9 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HPS3Q969F9 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS3Q969F9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HPS3Q969F9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.1■□□□□ 0.65
HPS3Q969F9 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.1■□□□□ 0.65
HPS3Q969F9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms