Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 MTHFR-217ENST00000641820 1569 ntBASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AC104640.1-201ENST00000562617 2109 ntBASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AC092850.2-201ENST00000623821 2697 ntBASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 AC005052.1-201ENST00000625181 2492 ntBASIC17.18■□□□□ 0.34
CKAP2Q8WWK9 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 GCSHP5-201ENST00000443090 522 ntBASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 AL359736.2-201ENST00000621992 437 ntBASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 AC066615.1-201ENST00000640911 628 ntBASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CKAP2Q8WWK9 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 AL391256.1-201ENST00000443260 1855 ntBASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 FAM197Y4-202ENST00000622692 608 ntBASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CKAP2Q8WWK9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 AC092384.3-202ENST00000564646 2873 ntBASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 MYCLP1-201ENST00000372451 1075 ntBASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CKAP2Q8WWK9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms