Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 AC005336.2-201ENST00000593183 939 ntBASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SLC44A1Q8WWI5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 AL353593.2-201ENST00000602529 1483 ntBASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 AL845331.1-201ENST00000424978 1190 ntBASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 CYP2T1P-202ENST00000641596 2535 ntBASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SLC44A1Q8WWI5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 AC009336.1-201ENST00000608941 1553 ntBASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 AL391005.1-201ENST00000623953 2435 ntBASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 GPR89P-201ENST00000407924 1495 ntBASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.3■□□□□ 0.36
SLC44A1Q8WWI5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms