Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 AL671277.1-201ENST00000429656 993 ntBASIC16■□□□□ 0.15
CT55Q8WUE5 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16■□□□□ 0.15
CT55Q8WUE5 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 GATB-205ENST00000508611 605 ntTSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16■□□□□ 0.15
CT55Q8WUE5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 AC109322.1-201ENST00000524499 1264 ntBASIC16■□□□□ 0.15
CT55Q8WUE5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 AC026120.1-201ENST00000611536 926 ntBASIC16■□□□□ 0.15
CT55Q8WUE5 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16■□□□□ 0.15
CT55Q8WUE5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16■□□□□ 0.15
CT55Q8WUE5 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 AL355312.1-201ENST00000407115 2176 ntBASIC16■□□□□ 0.15
CT55Q8WUE5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16■□□□□ 0.15
CT55Q8WUE5 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16■□□□□ 0.15
CT55Q8WUE5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16■□□□□ 0.15
CT55Q8WUE5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CT55Q8WUE5 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CT55Q8WUE5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
CT55Q8WUE5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 HLA-J-203ENST00000494367 1087 ntBASIC15.99■□□□□ 0.15
CT55Q8WUE5 KRT8P48-201ENST00000515599 1220 ntBASIC15.99■□□□□ 0.15
CT55Q8WUE5 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CT55Q8WUE5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.99■□□□□ 0.15
CT55Q8WUE5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.99■□□□□ 0.15
CT55Q8WUE5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.99■□□□□ 0.15
CT55Q8WUE5 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CT55Q8WUE5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CT55Q8WUE5 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.99■□□□□ 0.15
CT55Q8WUE5 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.99■□□□□ 0.15
CT55Q8WUE5 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 SLC25A6P5-201ENST00000435663 894 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 SPDYE11-202ENST00000450699 704 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 FAM86C2P-203ENST00000528684 1004 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 AC025678.2-201ENST00000562061 970 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 SPDYE9P-201ENST00000570642 692 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 MIR3197-201ENST00000582241 73 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 MIR4515-201ENST00000584082 81 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 AC011467.4-201ENST00000594891 528 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 SPDYE10P-202ENST00000612005 668 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 SPDYE8P-202ENST00000612377 668 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 AC093512.1-201ENST00000617969 520 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 LINC00628-201ENST00000628516 1289 ntBASIC15.98■□□□□ 0.15
CT55Q8WUE5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.98■□□□□ 0.15
CT55Q8WUE5 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CT55Q8WUE5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms