Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 AP000692.2-201ENST00000608391 879 ntBASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
DYNC2LI1Q8TCX1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 TCAF2P1-201ENST00000291129 2421 ntBASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 AC010491.1-201ENST00000563101 2797 ntBASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
DYNC2LI1Q8TCX1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 AL645728.1-201ENST00000366221 2101 ntBASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 AC096733.2-201ENST00000609937 1394 ntBASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 FER1L4-210ENST00000615531 5998 ntBASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 B3GAT3P1-201ENST00000471720 806 ntBASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 AP002982.1-201ENST00000492365 877 ntBASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 MIR6821-201ENST00000617625 74 ntBASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.26■□□□□ 0.03
DYNC2LI1Q8TCX1 AL596087.1-201ENST00000400979 1969 ntBASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
DYNC2LI1Q8TCX1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms